Package: BcDiag 1.0.10

BcDiag: Diagnostics Plots for Bicluster Data

Diagnostic tools based on two-way anova and median-polish residual plots for Bicluster output obtained from packages; "biclust" by Kaiser et al.(2008),"isa2" by Csardi et al. (2010) and "fabia" by Hochreiter et al. (2010). Moreover, It provides visualization tools for bicluster output and corresponding non-bicluster rows- or columns outcomes. It has also extended the idea of Kaiser et al.(2008) which is, extracting bicluster output in a text format, by adding two bicluster methods from the fabia and isa2 R packages.

Authors:Aregay Mengsteab, Martin Otava, Tatsiana Khamiakova, Ewoud De Troyer

BcDiag_1.0.10.tar.gz
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BcDiag.pdf |BcDiag.html✨
BcDiag/json (API)

# Install 'BcDiag' in R:
install.packages('BcDiag', repos = c('https://ewouddt.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • breastc - Gene Expression Data Example
  • dlbcl - Gene Expression Data Example

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.48 score 1 packages 758 downloads 5 exports 4 dependencies

Last updated 9 years agofrom:d6a7bb1811. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 08 2025
R-4.5-winOKMar 08 2025
R-4.5-macOKMar 08 2025
R-4.5-linuxOKMar 08 2025
R-4.4-winOKMar 08 2025
R-4.4-macOKMar 08 2025
R-4.4-linuxOKMar 08 2025
R-4.3-winOKMar 08 2025
R-4.3-macOKMar 08 2025

Exports:anomedOnlybicexploreBicexploreOnlybicprofileBicwriteBic

Dependencies:BiobaseBiocGenericsfabiagenerics