Package: BcDiag 1.0.10
BcDiag: Diagnostics Plots for Bicluster Data
Diagnostic tools based on two-way anova and median-polish residual plots for Bicluster output obtained from packages; "biclust" by Kaiser et al.(2008),"isa2" by Csardi et al. (2010) and "fabia" by Hochreiter et al. (2010). Moreover, It provides visualization tools for bicluster output and corresponding non-bicluster rows- or columns outcomes. It has also extended the idea of Kaiser et al.(2008) which is, extracting bicluster output in a text format, by adding two bicluster methods from the fabia and isa2 R packages.
Authors:
BcDiag_1.0.10.tar.gz
BcDiag_1.0.10.zip(r-4.5)BcDiag_1.0.10.zip(r-4.4)BcDiag_1.0.10.zip(r-4.3)
BcDiag_1.0.10.tgz(r-4.4-any)BcDiag_1.0.10.tgz(r-4.3-any)
BcDiag_1.0.10.tar.gz(r-4.5-noble)BcDiag_1.0.10.tar.gz(r-4.4-noble)
BcDiag_1.0.10.tgz(r-4.4-emscripten)BcDiag_1.0.10.tgz(r-4.3-emscripten)
BcDiag.pdf |BcDiag.html✨
BcDiag/json (API)
| # Install 'BcDiag' in R: |
| install.packages('BcDiag', repos = c('https://ewouddt.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 9 years agofrom:d6a7bb1811. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 08 2024 |
| R-4.5-win | OK | Nov 08 2024 |
| R-4.5-linux | OK | Nov 08 2024 |
| R-4.4-win | OK | Nov 08 2024 |
| R-4.4-mac | OK | Nov 08 2024 |
| R-4.3-win | OK | Nov 08 2024 |
| R-4.3-mac | OK | Nov 08 2024 |
Exports:anomedOnlybicexploreBicexploreOnlybicprofileBicwriteBic
Dependencies:BiobaseBiocGenericsfabiagenerics
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| The BCDiag package | BcDiag-package |
| The anomedOnlybic function | anomedOnlybic |
| Gene Expression Data Example | breastc |
| Gene Expression Data Example | dlbcl |
| The exploreBic function | exploreBic |
| The exploreOnlybic function | exploreOnlybic |
| The profileBic function. | profileBic |
| The writeBic function | writeBic |
